Signature	SharedGeneNum	SharedGenes	AvgPval	BreastC_M3 Chr16p11-13_UniqueNum	BreastC_M3 Chr16p11-13_pVal	BreastC_M3 Chr16p11-13_Unique	BreastC_M28 Chr11p15,q12-14_UniqueNum	BreastC_M28 Chr11p15,q12-14_pVal	BreastC_M28 Chr11p15,q12-14_Unique
CETS1P54_01	0		0.000145026254257	14	0.000170511669104	CCP110|DCTN5|DCUN1D3|ERI2|GDE1|GSPT1|GTF3C1|LYRM1|MLEC|PALB2|POLL|PPP4C|REXO5|ZNF768	10	0.00011954083941	ANAPC15|B3GAT3|CHID1|KAT5|PPME1|PRPF19|PSMD13|SIPA1|SYVN1|ZDHHC5
Chiche(PMID: 24644022)-2014_M9.3	0		0.000115878383665	11	0.000121139483485	ARFRP1|ARMC5|COG7|DNASE1|FBRS|HMOX2|NARFL|NUBP2|P3H4|TAOK2|ZNF646	8	0.000110617283845	ANKRD13D|AP2A2|BRMS1|PLCB3|PTDSS2|RCE1|USP35|ZFPL1
DNA repair [GoID:GO:0006281; evidenceTypes:IBA|IC|IDA|IEA|IEP|IGI|IMP|IPI|ISS|NAS|TAS]	0		0.000355298078862	21	0.000387889449235	EME2|ERCC4|INO80E|KIF22|MARF1|MPG|NSMCE1|NTHL1|NUDT16L1|PAGR1|PALB2|POLL|POLM|POLN|PPP4C|RTEL1|SLX1A|SLX4|STUB1|UBE2I|USP7	14	0.00032270670849	DDB1|EMSY|KAT5|KDM2A|MEN1|MUS81|ORAOV1|POLD3|POLR2G|POLR2L|PRPF19|RAD9A|RNF169|UVRAG
GSE21546_WT_VS_ELK1_KO_DP_THYMOCYTES_UP	0		0.000266089552748	13	4.97017409514e-05	ABCC1|AMH|GDE1|GDPD3|HSD3B7|LMF1|MMP17|NPRL3|ORAI3|PSPN|TBC1D24|VKORC1|ZNF205	8	0.000482477364545	AAMDC|ACER3|CTTN|FADD|MACROD1|MRPL48|STX3|VEGFB
GSE43863_NAIVE_VS_LY6C_LOW_CXCR5NEG_CD4_EFF_TCELL_D6_LCMV_DN	0		0.000347125875248	11	0.000681714002654	DECR2|FAM86C1|FAM173A|MPG|NDUFB10|P3H4|PAM16|RAB11FIP3|RAB40C|SLC35C2|THOC6	10	1.2537747843e-05	BET1L|CCS|COX8A|MACROD1|MUS81|POLR2L|PPP1R14B|TAF10|TMEM134|ZNHIT2
KIM_ALL_DISORDERS_DURATION_CORR_DN	0		6.74050398087e-05	11	6.59292197587e-05	ATP6AP1|CDIPT|ECI1|GDI1|GTF3C1|HCFC1R1|MAPK3|NTHL1|RNPS1|TRAP1|TUFM	8	6.88808598587e-05	COX8A|DPF2|HRAS|MRPL23|NRGN|RNH1|SF3B2|TALDO1
MARTENS_TRETINOIN_RESPONSE_DN	0		5.08993617934e-05	30	3.20528972096e-05	ARFRP1|ATXN2L|BRICD5|CCDC78|CRAMP1|DNASE1L2|EME2|ERP29|FAM173A|HAGHL|HCFC1R1|HIGD2A|MAZ|METRN|MRPS34|NDUFB10|NME3|NUDT16L1|PGP|PRR22|RAB26|TELO2|TMEM186|TUFM|WFIKKN1|ZNF200|ZNF598|ZNF629|ZNF646|ZSCAN32	19	6.97458263771e-05	ANKRD13D|CARNS1|CCDC85B|CLNS1A|COMTD1|CORO1B|DRAP1|FADD|FAM89B|FKBP2|NAP1L4|NTN3|POLR2L|PRDX5|RNH1|RPS6KB2|SLC29A2|TM7SF2|ZNHIT2
TEL2_Q6	0		1.43394532155e-05	15	1.79654749043e-05	ANKS3|C16ORF71|CD2BP2|DCTN5|DCUN1D3|HIRIP3|INO80E|LIME1|LYRM1|PALB2|POLL|PPP4C|RNPS1|ZNF646|ZNF768	11	1.07134315267e-05	CCDC85B|DPP3|ESRRA|FIBP|KAT5|MAP3K11|MAP4K2|PSMD13|SIPA1|SYVN1|ZDHHC5
